Examples of using Sequence alignment in English and their translations into Greek
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Multiple sequence alignment.
Sequence alignment- Wikipedia.
View multiple sequence alignment for GenBank.
Sequence Alignment and Dynamic Programming.
Combine combines two(or more) multiple sequence alignments into a single one.
DDV Sequence Alignment Viewer.
Global multiple nucleotide or peptide sequence alignment and phylogenetic analysis.
DNA sequence alignments and dynamic programming.
A very famous algorithm that performs sequence alignment is called the Smith-Waterman algorithm.
Such homologous proteins can be efficiently identified in distantly related organisms by sequence alignment.
A bug in the Multiple Sequence Alignment Editor has been fixed.
Another subject discussed in the training material is the phylogenetic analysis as a practical application of the multiple sequence alignment.
Edits multiple sequence alignments and prints them in PostScript format.
While playing the game and aligning the colored squares,one is helping the scientific community get a step closer to solving the age-old problem of multiple sequence alignment.
The problem of multiple sequence alignment is too big for computers to handle.
In addition, if you have Java™ installed in your computer, you can use Jalview,a free program for multiple sequence alignment editing, visualisation and analysis.
Title:"Multiple sequence alignment and applications in phylogenetic analysis and bioinformatics", Chronopoulos Athanasios.
The game is designed to take advantage of human visual intelligence to improve the sequence alignment of promoter regions in 521 genes associated with diseases from 44 vertebrate species.
Multiple sequence alignments can also be quantitatively examined to obtain data about certain gene family.
For example, the University of Washington Genome Center has an excellent tutorial on genome sequencing, andNCBI has a good practical tutorial on use of the BLAST sequence alignment program and its variants.
Multiple sequence alignments help in visual distinguishing of sites in a DNA or protein sequence that might be functionally important.
The problem with this approach is that the distribution of similarity scores for evolutionarily andfunctionally relevant sequence alignments is very broad and that a considerable fraction of them fail the E-value cutoff, resulting in undetected relationships and missed opportunities for functional prediction(false negatives).
A mitochondrial DNA sequence alignment for the wolf-like canids gave a phylogenetic tree with the side-striped jackal and the black-backed jackal being the most basal members of this clade, which means that this tree is indicating an African origin for the clade.
To process and analyse the huge amount of data collected through genomics initiatives,computational techniques from Bioinformatics- such as sequence alignment, sequence assembly, biostatistics and machine learning- are required in order to make predictions about health outcome and to decide on a personalized treatment for the patient.
The game explains that"a sequence alignment is a way of arranging the sequences of DNA, RNA or protein to identify regions of similarity".
One of the techniques used in bioinformatics is sequence alignment, which allows us to identify common biological sequences shared by different species.
The aim of the game is to improve the sequence alignment of promoter regions- which control when a gene is transcribed- of 521 disease-associated genes from 44 vertebrate species.
The information in a molecular sequence alignment can be used to compute a phylogenetic tree for a particular family of gene sequences. .
The game was created to address the'multiple sequence alignment(MSA) problem', which refers to the difficulty of aligning roughly similar sequences of DNA in genes common to many species.
If the species are too divergent for a DNA sequence alignment to detect similarity, then the PROmer program can generate alignments based upon the six-frame translations of both input sequences.