英語 での Blast search の使用例とその 日本語 への翻訳
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Results from BLAST search.
BLAST Search Result Mapping.
Local BLAST Search(v15/v14).
This completes the creation of the database for Blast search.
The Blast search results dialog is displayed.
Drag the mouse and select the area to perform Blast search.
BLAST search using own sequence data and keyword search are available.
Clone name search, keyword search, BLAST search is possible.
BLAST searches using own sequence data and data downloads are also possible.
The execution confirmation dialog is expanded and displayed, and Blast search execution parameters are displayed.
Easy management of BLAST search parameters, FASTA data and search results.
Users can performkeyword searches of gene annotations in the genome, BLAST searches of genomic sequences, and download data.
Genome Browser and BLAST search for genomes, EST and shotgun reads are provided.
When the search is completed, a completion message"Completed!"Is displayed and the Blast search result dialog is displayed.
BLAST search will be performed on the server.Search results will be viewed on user's Computer using standard browsers.
The nucleotide sequence and amino acid sequence of the genomic sequence loaded in the current referencedirectory can be selected as a database for Blast search.
Please check this out for details BL color button: When a Blast search result is given to each feature to be drawn, it is drawn with the fill color assigned to that score range.
In IMCGE, AE, and DS, multiple genome sequences can be loaded simultaneously into the current reference directory,so multiple Blast search databases are generated at the same time.
Perform a Blast search on the genomic base sequence and amino acid sequence on the current reference directory, with one feature on the main feature map as the query sequence.
The free NCBItool Primer-BLAST integrates primer design and BLAST search into one application,[3] as do commercial software products such as ePrime and Beacon Designer.
In search of top-1 and tie sequences whose percent-identity to query is 99% or more, we can expect that overleaping hardly occur evenif-task megablast-word_size 16 is given as BLAST search argument, thus this argument is specified.
There are tools that combine BLAST searches with links to articles from UniProt and GenBank(7- 9), but since these tools do not search the literature, their coverage is limited.
Homology Search By simply loading the genomic base sequence into the reference genome map,a database for Blast search is automatically created and homology search( Blast) search for that database can be easily performed.
The timing for generating the Blast search database is when the new base sequence file is loaded into the current reference directory and when the current reference directory is changed.
This shows that two types of Blast search databases are generated from the loaded genomic sequence and are automatically registered as a base sequence database and as an amino acid sequence database.
About VecScreen VecScreen is a tool that can detect foreign DNAs such as vector, linker, adapter, and primer regions(we call vector contamination in this document) involved in nucleotide sequences(query)by using blast search against vector sequence database.
Click"Show Parameter" on this dialog to display the Blast search parameters and change the Blast search execution parameters. Blast search execution parameters will be explained separately.
IMC E04A1 Blast Search for Reference Genome by Entering Query Sequence Specify it by directly entering or pasting the query sequence and performing homology search on the sequences loaded in the current main directroy, current reference directory and on registered databases.